A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns

Journal: Nature Communications

Published: 2020-02-05

DOI: 10.1038/s41467-019-13825-8

Affiliations: 69

Authors: 61

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Institutions Share
Massachusetts General Hospital (MGH), United States of America (USA) 0.11
Computational Biology Program, OICR, Canada 0.09
Genome Informatics Program, OICR, Canada 0.06
UMC Utrecht Center for Molecular Medicine (CMM), Netherlands 0.04
Broad Institute of MIT and Harvard, United States of America (USA) 0.04
Wolfson Wohl Cancer Research Centre, University of Glasgow, United Kingdom (UK) 0.03
Ontario Institute for Cancer Research (OICR), Canada 0.03
Division of Molecular Biology, University of Zagreb, Croatia 0.03
Oregon Health and Science University (OHSU), United States of America (USA) 0.03
MRC Institute of Genetics and Molecular Medicine (IGMM), United Kingdom (UK) 0.03
Department of Molecular Genetics, U of T, Canada 0.03
University of Glasgow, United Kingdom (UK) 0.02
Wellcome Trust Genome Campus, United Kingdom (UK) 0.02
Harvard Medical School (HMS), United States of America (USA) 0.02
Department of Oncological Sciences, ISMMS, United States of America (USA) 0.02
Weill Cornell Medicine (WCM), Cornell University, United States of America (USA) 0.02
Dana-Farber Cancer Institute (DFCI), United States of America (USA) 0.02
Sage Bionetworks, United States of America (USA) 0.02
Radboud University Medical Centre (Radboudumc), RU, Netherlands 0.02
Bioinformatics Unit, CNIO, Spain 0.02
University of Melbourne Centre for Cancer Research (UMCCR), UniMelb, Australia 0.02
Division of Medical Oncology, NKI, Netherlands 0.02
National Cancer Center Research Institute (NCCRI), Japan 0.02
Vector Institute, Canada 0.01
Department of Medical Biophysics, U of T, Canada 0.01
Center for Cancer Research, MGH, United States of America (USA) 0.01
University of New South Wales (UNSW Sydney), Australia 0.01
The Kinghorn Cancer Centre (TKCC), Australia 0.01
UNC Lineberger Comprehensive Cancer Center, United States of America (USA) 0.01
UNC Department of Genetics, United States of America (USA) 0.01
Institute of Human Genetics, UKSH Kiel, Germany 0.01
Laboratory of Molecular Medicine, UTokyo, Japan 0.01
Cancer Institute, Erasmus MC, Netherlands 0.01
Institute of Human Genetics, Ulm University, Germany 0.01
UCSF Department of Radiation Oncology, United States of America (USA) 0.01
CRUK Beatson Institute for Cancer Research, United Kingdom (UK) 0.01
National Centre for Genomic Analysis (CNAG), CRG BIST, Spain 0.01
Department of Medical Oncology, Erasmus MC, Netherlands 0.01
Pompeu Fabra University (UPF), Spain 0.01
MRC-University of Glasgow Centre for Virus Research (CVR), United Kingdom (UK) 0.01
Division of Cancer Genomics, NCC, Japan 0.01
Department of Haematology, University of Cambridge, United Kingdom (UK) 0.01
Oncode Institute, Netherlands 0.01
School of Computing Science (SCS), University of Glasgow, United Kingdom (UK) 0.01
Department of Translational Molecular Pathology, MD Anderson Cancer Center, United States of America (USA) 0.01
Department of Genomic Medicine, MD Anderson Cancer Center, United States of America (USA) 0.01
Department of Pathology, MD Anderson Cancer Center, United States of America (USA) 0.01
Cancer Research UK Cambridge Institute (CRUK-CI), University of Cambridge, United Kingdom (UK) 0.01
Hartwig Medical Foundation, Netherlands 0.01
University of California, Los Angeles (UCLA), United States of America (USA) 0
School of Clinical Medicine, University of Cambridge, United Kingdom (UK) 0
MRC Cancer Unit, University of Cambridge, United Kingdom (UK) 0
Department of Pharmacology and Toxicology, U of T, Canada 0
Department of Pathology, MGH, United States of America (USA) 0
Academic Department of Medical Genetics, University of Cambridge, United Kingdom (UK) 0
Department of Computer Science, U of T, Canada 0
Terrence Donnelly Centre for Cellular and Biomolecular Research (CCBR), U of T, Canada 0
South Western Sydney Clinical School (SWSCS), UNSW Sydney, Australia 0
Glasgow Royal Infirmary (GRI), United Kingdom (UK) 0
Bern Center for Precision Medicine (BCPM), UniBE, Switzerland 0
Bern University Hospital, Switzerland 0
Department for BioMedical Research (DBMR), UniBE, Switzerland 0
Caryl and Israel Englander Institute for Precision Medicine (IPM), Cornell University, United States of America (USA) 0
Sandra and Edward Meyer Cancer Center, Cornell University, United States of America (USA) 0
Department of Pathology and Laboratory Medicine, Cornell University, United States of America (USA) 0

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